Claude Skills · Research

Structure manipulation and crystal analysis workflows based on pymatgen. USE WHEN you need to read/write common atomistic formats (CIF, POSCAR, XYZ), build supercells, perform site substitution/doping, inspect symmetry (space group), or compute local structure descriptors for materials tasks.

★ 136 LGPL-3.0-or-later Synced 2 hours ago View SKILL.md

At a glance

Research Manual install Python Actively maintained LGPL-3.0-or-later

This skill is for Research and helps you read and write crystal structure files, build supercells from atomic structures, and perform site substitution and doping.

Install git clone --depth 1 https://github.com/jinzhezenggroup/computational-chemistry-agent-skills cp -r computational-chemistry-agent-skills/data-processing/pymatgen-structure ~/.claude/skills/pymatgen-structure
Can use Not declared by the author

Setup, runtime and requirements describe jinzhezenggroup/computational-chemistry-agent-skills, the repo this skill ships in.

PymatgenCrystallographymaterials-scienceCifPoscarAtomistic Simulation

Also in jinzhezenggroup/computational-chemistry-agent-skills

View the repo

It is a specification for semantic workflows used by agents to plan, generate, formalize, summarize, and execute complex tasks, projects, ex...

A command-line tool in AmberTools for preparing small molecules or non-standard residues within GAFF/AMBER-compatible chemical space for mol...

Ase Coding

Unified ASE router skill with a tree of subskills for static/relax/MD/NEB workflows and backend adapters (GPAW, MACE). Use when you need bac...

Fine-tune a DPA3 model in DeePMD-kit using the PyTorch backend. Use when the user wants to adapt a pre-trained DPA3 model to a new downstrea...

Run Python inference with DeePMD-kit models using the DeepPot API. Use when the user wants to load a trained/frozen DeePMD model (.pth or .p...

Deepmd Train Coding

Train DeePMD-kit models with progressive disclosure. Use when the user wants to train a DeePMD-kit potential, prepare an input.json, choose...

Dft Abinit Research

Route ABINIT requests to task-specific subskills based on user intent. Use when the user asks for ABINIT workflows and you must decide betwe...

Route DFTB+ requests to task-specific subskills based on user intent. Use when the user asks for DFTB+ workflows and you must decide between...

Route CP2K requests to task-specific subskills based on user intent. Use when the user asks for CP2K workflows and you must decide between s...

Dft Gpaw Research

Route GPAW DFT requests to task-specific subskills based on user intent. Use when the user asks for GPAW workflows and you must decide betwe...

Generate Quantum ESPRESSO DFT input tasks from a user-provided structure plus user-specified DFT settings. Use when the user wants to prepar...

Dft Siesta DevOps & Infrastructure

Route SIESTA requests to task-specific subskills based on user intent. Use when the user asks for SIESTA workflows and you must decide betwe...

Other Research skills

Research mattpocock/skills

Investigate a question against high-trust primary sources and capture the findings as a Markdown file in the repo. Use when the user wants a...

X Research nexu-io/open-design

X/Twitter public sentiment research for recent market, company, product, or community discourse. Use when the brief asks what people are say...

Last30days nexu-io/open-design

Recent community and social trend research over the last 30 days. Use when the brief asks what people are saying now, recent sentiment, comm...

Build Evidence Map github/awesome-copilot

Build an auditable evidence map for a contested technical choice, research synthesis, proposal review, or consequential decision. Use when C...

Persona Researcher googleworkspace/cli

Organize research — manage references, notes, and collaboration.

Aihot KKKKhazix/khazix-skills

查询 AI HOT 的中文 AI 资讯、精选、当前热点和日报。用户询问今天或最近的 AI 新闻、AI 圈动态、大模型或产品发布、OpenAI/Anthropic/Google 最新...